A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
Report
generated on 2021-09-15, 11:07
based on data in:
/home/r3clark/PIRE/pire_cssl_data_processing/gazza_minuta/fq_fp1_clmp_fp2
General Statistics
Showing 175/175 rows and 4/6 columns.| Sample Name | % Duplication | GC content | % PF | % Adapter |
|---|---|---|---|---|
| GmA01001_CKDL210018111-1a-5UDI301-AK533_HH72GDSX2_L1_clmp_r1r2_fastp | 7.8% | 47.2% | 99.1% | 1.7% |
| GmA01002_CKDL210018111-1a-5UDI301-AK8488_HH72GDSX2_L1_clmp_r1r2_fastp | 7.8% | 48.8% | 99.1% | 2.0% |
| GmA01003_CKDL210018111-1a-5UDI301-AK4236_HH72GDSX2_L1_clmp_r1r2_fastp | 8.1% | 49.1% | 99.0% | 2.0% |
| GmA01004_CKDL210018111-1a-AK7078-AK4234_HH72GDSX2_L1_clmp_r1r2_fastp | 7.9% | 47.5% | 99.2% | 2.0% |
| GmA01010_CKDL210018111-1a-AK7758-AK4234_HH72GDSX2_L1_clmp_r1r2_fastp | 8.2% | 49.2% | 99.1% | 2.2% |
| GmA01011_CKDL210018111-1a-AK7758-GD06_HH72GDSX2_L1_clmp_r1r2_fastp | 7.2% | 45.4% | 99.1% | 2.6% |
| GmA01013_CKDL210018111-1a-5UDI301-AK7557_HH72GDSX2_L1_clmp_r1r2_fastp | 7.3% | 47.9% | 99.0% | 2.3% |
| GmA01014_CKDL210018111-1a-5UDI301-GC06_HH72GDSX2_L1_clmp_r1r2_fastp | 5.9% | 42.3% | 99.2% | 2.7% |
| GmA01015_CKDL210018111-1a-5UDI301-AK10343_HH72GDSX2_L1_clmp_r1r2_fastp | 7.6% | 38.5% | 99.1% | 1.8% |
| GmA01016_CKDL210018111-1a-5UDI301-AK4234_HH72GDSX2_L1_clmp_r1r2_fastp | 6.7% | 40.2% | 99.2% | 2.4% |
| GmA01017_CKDL210018111-1a-AK7078-GD06_HH72GDSX2_L1_clmp_r1r2_fastp | 9.0% | 50.0% | 99.1% | 1.7% |
| GmA01018_CKDL210018111-1a-AK7758-AK7557_HH72GDSX2_L1_clmp_r1r2_fastp | 7.1% | 44.7% | 99.1% | 2.2% |
| GmA01026_CKDL210018111-1a-AK7078-AK8488_HH72GDSX2_L1_clmp_r1r2_fastp | 8.5% | 49.6% | 99.2% | 1.8% |
| GmA01027_CKDL210018111-1a-AK7078-AK4236_HH72GDSX2_L1_clmp_r1r2_fastp | 9.5% | 49.5% | 99.0% | 1.8% |
| GmA01028_CKDL210018111-1a-5UDI301-GD06_HH72GDSX2_L1_clmp_r1r2_fastp | 7.1% | 44.7% | 99.2% | 2.2% |
| GmA01029_CKDL210018111-1a-AK7758-AK533_HH72GDSX2_L1_clmp_r1r2_fastp | 8.0% | 49.8% | 99.1% | 2.1% |
| GmA01030_CKDL210018111-1a-AK7758-AK8488_HH72GDSX2_L1_clmp_r1r2_fastp | 7.3% | 44.2% | 99.2% | 2.2% |
| GmA01031_CKDL210018111-1a-AK7758-AK4236_HH72GDSX2_L1_clmp_r1r2_fastp | 6.7% | 41.0% | 99.1% | 2.6% |
| GmA01032_CKDL210018111-1a-AK7758-AK10343_HH72GDSX2_L1_clmp_r1r2_fastp | 6.6% | 43.5% | 99.2% | 2.4% |
| GmA01033_CKDL210018111-1a-AK9143-AK4234_HH72GDSX2_L1_clmp_r1r2_fastp | 7.2% | 40.2% | 99.2% | 2.2% |
| GmA01035_CKDL210018111-1a-AK7078-AK533_HH72GDSX2_L1_clmp_r1r2_fastp | 6.6% | 42.8% | 99.1% | 2.5% |
| GmA01037_CKDL210018111-1a-AK7078-AK7557_HH72GDSX2_L1_clmp_r1r2_fastp | 6.6% | 43.9% | 99.1% | 2.5% |
| GmA01039_CKDL210018111-1a-AK7078-AK10343_HH72GDSX2_L1_clmp_r1r2_fastp | 8.0% | 45.0% | 99.1% | 2.0% |
| GmA01041_CKDL210018111-1a-AK9143-AK533_HH72GDSX2_L1_clmp_r1r2_fastp | 8.1% | 41.9% | 99.2% | 2.1% |
| GmA01042_CKDL210018111-1a-AK7758-GC06_HH72GDSX2_L1_clmp_r1r2_fastp | 6.3% | 43.6% | 99.2% | 2.4% |
| GmA01055_CKDL210018111-1a-AK9143-AK4236_HH72GDSX2_L1_clmp_r1r2_fastp | 8.0% | 35.2% | 99.1% | 2.0% |
| GmA01060_CKDL210018111-1a-5UDI225-AK533_HH72GDSX2_L1_clmp_r1r2_fastp | 7.9% | 40.9% | 99.1% | 2.5% |
| GmA01065_CKDL210018111-1a-AK9143-AK7557_HH72GDSX2_L1_clmp_r1r2_fastp | 7.2% | 36.1% | 99.0% | 2.2% |
| GmA01074_CKDL210018111-1a-AK7078-GC06_HH72GDSX2_L1_clmp_r1r2_fastp | 10.2% | 33.8% | 99.1% | 1.7% |
| GmA01078_CKDL210018111-1a-AK9143-GC06_HH72GDSX2_L1_clmp_r1r2_fastp | 6.9% | 39.8% | 99.2% | 2.2% |
| GmA01079_CKDL210018111-1a-AK9143-AK10343_HH72GDSX2_L1_clmp_r1r2_fastp | 7.4% | 39.9% | 99.2% | 2.2% |
| GmA01083_CKDL210018111-1a-AK9143-GD06_HH72GDSX2_L1_clmp_r1r2_fastp | 7.6% | 40.7% | 99.1% | 2.3% |
| GmA01089_CKDL210018111-1a-AK9143-AK8488_HH72GDSX2_L1_clmp_r1r2_fastp | 8.4% | 35.0% | 99.1% | 1.8% |
| GmA02001_CKDL210018111-1a-AK3911-AK4234_HH72GDSX2_L1_clmp_r1r2_fastp | 8.1% | 52.7% | 99.3% | 1.6% |
| GmA02002_CKDL210018111-1a-5UDI225-AK7557_HH72GDSX2_L1_clmp_r1r2_fastp | 7.1% | 42.5% | 99.1% | 2.4% |
| GmA02004_CKDL210018111-1a-5UDI225-AK4236_HH72GDSX2_L1_clmp_r1r2_fastp | 8.1% | 50.4% | 99.2% | 1.9% |
| GmA02005_CKDL210018111-1a-5UDI225-AK10343_HH72GDSX2_L1_clmp_r1r2_fastp | 7.3% | 45.1% | 99.3% | 2.5% |
| GmA02006_CKDL210018111-1a-5UDI225-AK4234_HH72GDSX2_L1_clmp_r1r2_fastp | 6.9% | 44.3% | 99.3% | 2.6% |
| GmA02007_CKDL210018111-1a-AK9144-AK8488_HH72GDSX2_L1_clmp_r1r2_fastp | 9.8% | 51.6% | 99.1% | 1.8% |
| GmA02008_CKDL210018111-1a-AK9144-AK10343_HH72GDSX2_L1_clmp_r1r2_fastp | 11.1% | 62.3% | 99.2% | 1.3% |
| GmA02017_CKDL210018111-1a-5UDI225-AK8488_HH72GDSX2_L1_clmp_r1r2_fastp | 6.6% | 44.1% | 99.3% | 2.5% |
| GmA02018_CKDL210018111-1a-AK9144-AK7557_HH72GDSX2_L1_clmp_r1r2_fastp | 7.7% | 42.6% | 99.0% | 2.6% |
| GmA02019_CKDL210018111-1a-AK9144-GC06_HH72GDSX2_L1_clmp_r1r2_fastp | 8.2% | 44.5% | 99.1% | 2.4% |
| GmA02020_CKDL210018111-1a-AK9144-AK4234_HH72GDSX2_L1_clmp_r1r2_fastp | 8.7% | 46.6% | 99.1% | 2.3% |
| GmA02021_CKDL210018111-1a-AK9144-GD06_HH72GDSX2_L1_clmp_r1r2_fastp | 9.3% | 51.2% | 99.0% | 2.1% |
| GmA02022_CKDL210018111-1a-5UDI225-GC06_HH72GDSX2_L1_clmp_r1r2_fastp | 6.1% | 41.2% | 99.3% | 2.7% |
| GmA02023_CKDL210018111-1a-AK3911-GC06_HH72GDSX2_L1_clmp_r1r2_fastp | 7.5% | 53.2% | 99.2% | 1.9% |
| GmA02028_CKDL210018111-1a-5UDI245-AK533_HH72GDSX2_L1_clmp_r1r2_fastp | 9.1% | 43.1% | 99.0% | 2.1% |
| GmA02030_CKDL210018111-1a-5UDI225-GD06_HH72GDSX2_L1_clmp_r1r2_fastp | 8.3% | 46.9% | 98.9% | 2.3% |
| GmA02033_CKDL210018111-1a-AK3911-AK533_HH72GDSX2_L1_clmp_r1r2_fastp | 9.1% | 47.6% | 98.9% | 2.1% |
| GmA02034_CKDL210018111-1a-5UDI245-AK7557_HH72GDSX2_L1_clmp_r1r2_fastp | 8.6% | 45.4% | 98.7% | 2.5% |
| GmA02035_CKDL210018111-1a-5UDI245-AK8488_HH72GDSX2_L1_clmp_r1r2_fastp | 8.6% | 43.3% | 98.8% | 2.8% |
| GmA02044_CKDL210018111-1a-AK3911-GD06_HH72GDSX2_L1_clmp_r1r2_fastp | 7.4% | 42.0% | 98.6% | 3.3% |
| GmA02045_CKDL210018111-1a-AK3911-AK7557_HH72GDSX2_L1_clmp_r1r2_fastp | 7.2% | 26.8% | 98.8% | 2.3% |
| GmA02047_CKDL210018111-1a-AK3911-AK4236_HH72GDSX2_L1_clmp_r1r2_fastp | 8.9% | 52.8% | 99.0% | 1.7% |
| GmA02049_CKDL210018111-1a-AK9144-AK533_HH72GDSX2_L1_clmp_r1r2_fastp | 9.6% | 26.8% | 99.0% | 1.9% |
| GmA02054_CKDL210018111-1a-5UDI245-GC06_HH72GDSX2_L1_clmp_r1r2_fastp | 8.1% | 41.4% | 98.7% | 3.2% |
| GmA02055_CKDL210018111-1a-AK9144-AK4236_HH72GDSX2_L1_clmp_r1r2_fastp | 10.0% | 44.2% | 98.9% | 2.1% |
| GmA02058_CKDL210018111-1a-AK3911-AK8488_HH72GDSX2_L1_clmp_r1r2_fastp | 9.3% | 58.0% | 99.2% | 1.2% |
| GmA02059_CKDL210018111-1a-AK3911-AK10343_HH72GDSX2_L1_clmp_r1r2_fastp | 8.9% | 54.2% | 99.1% | 1.6% |
| GmA02060_CKDL210018111-1a-5UDI245-AK10343_HH72GDSX2_L1_clmp_r1r2_fastp | 8.8% | 44.0% | 98.9% | 2.4% |
| GmC01002_CKDL210018111-1a-AK3905-7UDI214_HH72GDSX2_L1_clmp_r1r2_fastp | 29.4% | 50.5% | 98.4% | 0.8% |
| GmC01005_CKDL210018111-1a-AK9142-7UDI214_HH72GDSX2_L1_clmp_r1r2_fastp | 14.0% | 45.9% | 99.0% | 0.8% |
| GmC01006_CKDL210018111-1a-AK8410-7UDI214_HH72GDSX2_L1_clmp_r1r2_fastp | 28.1% | 51.3% | 98.5% | 0.6% |
| GmC01008_CKDL210018111-1a-AK7759-7UDI214_HH72GDSX2_L1_clmp_r1r2_fastp | 31.9% | 41.9% | 98.7% | 1.7% |
| GmC01009_CKDL210018111-1a-AK6881-7UDI214_HH72GDSX2_L1_clmp_r1r2_fastp | 30.0% | 49.5% | 98.5% | 0.8% |
| GmC01012_CKDL210018111-1a-5UDI312-7UDI214_HH72GDSX2_L1_clmp_r1r2_fastp | 9.7% | 47.1% | 98.2% | 1.0% |
| GmC01013_CKDL210018111-1a-AK9141-AK4971_HH72GDSX2_L1_clmp_r1r2_fastp | 28.7% | 49.1% | 98.5% | 0.7% |
| GmC01014_CKDL210018111-1a-AK3905-AK4971_HH72GDSX2_L1_clmp_r1r2_fastp | 31.7% | 48.4% | 98.1% | 0.6% |
| GmC01016_CKDL210018111-1a-5UDI298-AK4971_HH72GDSX2_L1_clmp_r1r2_fastp | 30.3% | 49.6% | 98.3% | 0.5% |
| GmC01017_CKDL210018111-1a-AK9142-AK4971_HH72GDSX2_L1_clmp_r1r2_fastp | 32.7% | 43.2% | 98.6% | 1.6% |
| GmC01018_CKDL210018111-1a-AK8410-AK4971_HH72GDSX2_L1_clmp_r1r2_fastp | 27.5% | 50.0% | 98.5% | 0.7% |
| GmC01021_CKDL210018111-1a-AK6881-AK4971_HH72GDSX2_L1_clmp_r1r2_fastp | 10.6% | 47.6% | 98.6% | 0.8% |
| GmC01022_CKDL210018111-1a-AK6260-AK4971_HH72GDSX2_L1_clmp_r1r2_fastp | 31.8% | 49.7% | 98.2% | 0.6% |
| GmC01026_CKDL210018111-1a-AK3905-AK1864_HH72GDSX2_L1_clmp_r1r2_fastp | 29.4% | 47.8% | 98.5% | 1.6% |
| GmC01028_CKDL210018111-1a-5UDI298-AK1864_HH72GDSX2_L1_clmp_r1r2_fastp | 33.9% | 48.4% | 98.2% | 0.6% |
| GmC01029_CKDL210018111-1a-AK9142-AK1864_HH72GDSX2_L1_clmp_r1r2_fastp | 29.5% | 46.4% | 98.6% | 1.5% |
| GmC01032_CKDL210018111-1a-AK7759-AK1864_HH72GDSX2_L1_clmp_r1r2_fastp | 37.3% | 42.1% | 98.5% | 1.7% |
| GmC01033_CKDL210018111-1a-AK6881-AK1864_HH72GDSX2_L1_clmp_r1r2_fastp | 30.0% | 50.8% | 98.3% | 0.5% |
| GmC01035_CKDL210018111-1a-AK7010-AK1864_HH72GDSX2_L1_clmp_r1r2_fastp | 29.7% | 50.9% | 98.3% | 0.7% |
| GmC01036_CKDL210018111-1a-5UDI312-AK1864_HH72GDSX2_L1_clmp_r1r2_fastp | 29.4% | 50.8% | 98.3% | 0.6% |
| GmC01037_CKDL210018111-1a-AK9141-AK7558_HH72GDSX2_L1_clmp_r1r2_fastp | 28.6% | 49.8% | 98.5% | 0.6% |
| GmC01038_CKDL210018111-1a-AK3905-AK7558_HH72GDSX2_L1_clmp_r1r2_fastp | 33.1% | 49.0% | 98.1% | 0.6% |
| GmC01040_CKDL210018111-1a-5UDI298-AK7558_HH72GDSX2_L1_clmp_r1r2_fastp | 14.6% | 48.7% | 99.0% | 0.5% |
| GmC01041_CKDL210018111-1a-AK9142-AK7558_HH72GDSX2_L1_clmp_r1r2_fastp | 30.7% | 44.6% | 98.6% | 1.5% |
| GmC01042_CKDL210018111-1a-AK8410-AK7558_HH72GDSX2_L1_clmp_r1r2_fastp | 26.4% | 47.7% | 98.7% | 0.9% |
| GmC01045_CKDL210018111-1a-AK6881-AK7558_HH72GDSX2_L1_clmp_r1r2_fastp | 34.5% | 49.3% | 98.1% | 0.6% |
| GmC01047_CKDL210018111-1a-AK7010-AK7558_HH72GDSX2_L1_clmp_r1r2_fastp | 28.0% | 45.9% | 98.7% | 1.6% |
| GmC01051_CKDL210018111-1a-AK7761-7UDI308_HH72GDSX2_L1_clmp_r1r2_fastp | 16.2% | 47.8% | 98.7% | 0.9% |
| GmC01053_CKDL210018111-1a-AK9142-7UDI308_HH72GDSX2_L1_clmp_r1r2_fastp | 26.8% | 48.6% | 98.4% | 0.6% |
| GmC01054_CKDL210018111-1a-AK8410-7UDI308_HH72GDSX2_L1_clmp_r1r2_fastp | 26.6% | 45.7% | 98.7% | 1.4% |
| GmC01057_CKDL210018111-1a-AK6881-7UDI308_HH72GDSX2_L1_clmp_r1r2_fastp | 29.3% | 44.5% | 98.7% | 1.9% |
| GmC01058_CKDL210018111-1a-AK6260-7UDI308_HH72GDSX2_L1_clmp_r1r2_fastp | 28.4% | 47.9% | 98.5% | 0.5% |
| GmC01061_CKDL210018111-1a-AK9141-AK2587_HH72GDSX2_L1_clmp_r1r2_fastp | 31.9% | 48.0% | 98.2% | 0.6% |
| GmC01062_CKDL210018111-1a-AK3905-AK2587_HH72GDSX2_L1_clmp_r1r2_fastp | 8.1% | 47.5% | 98.5% | 0.9% |
| GmC01066_CKDL210018111-1a-AK8410-AK2587_HH72GDSX2_L1_clmp_r1r2_fastp | 27.6% | 48.3% | 98.4% | 0.6% |
| GmC01068_CKDL210018111-1a-AK7759-AK2587_HH72GDSX2_L1_clmp_r1r2_fastp | 27.7% | 49.4% | 98.5% | 0.7% |
| GmC01069_CKDL210018111-1a-AK6881-AK2587_HH72GDSX2_L1_clmp_r1r2_fastp | 29.3% | 46.9% | 98.5% | 1.5% |
| GmC01070_CKDL210018111-1a-AK6260-AK2587_HH72GDSX2_L1_clmp_r1r2_fastp | 28.1% | 48.6% | 98.4% | 0.5% |
| GmC01071_CKDL210018111-1a-AK7010-AK2587_HH72GDSX2_L1_clmp_r1r2_fastp | 30.4% | 50.3% | 98.5% | 1.7% |
| GmC01072_CKDL210018111-1a-5UDI312-AK2587_HH72GDSX2_L1_clmp_r1r2_fastp | 35.6% | 51.2% | 97.9% | 0.6% |
| GmC01073_CKDL210018111-1a-AK9141-GC12_HH72GDSX2_L1_clmp_r1r2_fastp | 36.7% | 45.7% | 98.3% | 1.5% |
| GmC01074_CKDL210018111-1a-AK3905-GC12_HH72GDSX2_L1_clmp_r1r2_fastp | 26.9% | 49.2% | 98.5% | 0.6% |
| GmC01075_CKDL210018111-1a-AK7761-GC12_HH72GDSX2_L1_clmp_r1r2_fastp | 30.8% | 49.3% | 98.3% | 0.6% |
| GmC01077_CKDL210018111-1a-AK9142-GC12_HH72GDSX2_L1_clmp_r1r2_fastp | 27.7% | 50.2% | 98.3% | 0.6% |
| GmC01078_CKDL210018111-1a-AK8410-GC12_HH72GDSX2_L1_clmp_r1r2_fastp | 27.0% | 48.4% | 98.4% | 0.6% |
| GmC01080_CKDL210018111-1a-AK7759-GC12_HH72GDSX2_L1_clmp_r1r2_fastp | 10.3% | 47.4% | 98.7% | 0.7% |
| GmC01081_CKDL210018111-1a-AK6881-GC12_HH72GDSX2_L1_clmp_r1r2_fastp | 26.9% | 50.1% | 98.4% | 0.7% |
| GmC01082_CKDL210018111-1a-AK6260-GC12_HH72GDSX2_L1_clmp_r1r2_fastp | 26.9% | 51.2% | 98.2% | 0.8% |
| GmC01085_CKDL210018111-1a-AK9141-7UDI246_HH72GDSX2_L1_clmp_r1r2_fastp | 29.4% | 49.0% | 98.4% | 0.6% |
| GmC01086_CKDL210018111-1a-AK3905-7UDI246_HH72GDSX2_L1_clmp_r1r2_fastp | 29.9% | 49.4% | 98.2% | 0.6% |
| GmC01087_CKDL210018111-1a-AK7761-7UDI246_HH72GDSX2_L1_clmp_r1r2_fastp | 31.6% | 47.9% | 98.5% | 1.4% |
| GmC01089_CKDL210018111-1a-AK9142-7UDI246_HH72GDSX2_L1_clmp_r1r2_fastp | 31.2% | 48.7% | 98.2% | 0.5% |
| GmC01090_CKDL210018111-1a-AK8410-7UDI246_HH72GDSX2_L1_clmp_r1r2_fastp | 32.3% | 49.0% | 98.4% | 1.1% |
| GmC01092_CKDL210018111-1a-AK7759-7UDI246_HH72GDSX2_L1_clmp_r1r2_fastp | 29.6% | 48.4% | 98.3% | 0.5% |
| GmC01093_CKDL210018111-1a-AK6881-7UDI246_HH72GDSX2_L1_clmp_r1r2_fastp | 9.6% | 47.7% | 98.9% | 0.8% |
| GmC01094_CKDL210018111-1a-AK6260-7UDI246_HH72GDSX2_L1_clmp_r1r2_fastp | 29.4% | 50.6% | 98.3% | 0.6% |
| GmC01095_CKDL210018111-1a-AK7010-7UDI246_HH72GDSX2_L1_clmp_r1r2_fastp | 31.2% | 49.1% | 98.2% | 1.0% |
| GmC01096_CKDL210018111-1a-5UDI312-7UDI246_HH72GDSX2_L1_clmp_r1r2_fastp | 26.9% | 48.5% | 98.7% | 1.6% |
| GmC02001_CKDL210018111-1a-5UDI298-7UDI243_HH72GDSX2_L1_clmp_r1r2_fastp | 25.5% | 49.3% | 98.5% | 0.7% |
| GmC02002_CKDL210018111-1a-AK9142-AK33_HH72GDSX2_L1_clmp_r1r2_fastp | 23.2% | 48.3% | 98.7% | 0.8% |
| GmC02006_CKDL210018111-1a-AK6260-AK8544_HH72GDSX2_L1_clmp_r1r2_fastp | 34.0% | 52.7% | 98.2% | 0.7% |
| GmC02007_CKDL210018111-1a-AK7010-AK892_HH72GDSX2_L1_clmp_r1r2_fastp | 7.2% | 48.6% | 98.7% | 1.3% |
| GmC02008_CKDL210018111-1a-AK7759-7UDI243_HH72GDSX2_L1_clmp_r1r2_fastp | 24.5% | 50.3% | 98.4% | 0.6% |
| GmC02011_CKDL210018111-1a-AK9142-7UDI298_HH72GDSX2_L1_clmp_r1r2_fastp | 25.0% | 48.6% | 98.7% | 0.6% |
| GmC02012_CKDL210018111-1a-AK6260-AK9148_HH72GDSX2_L1_clmp_r1r2_fastp | 28.8% | 50.3% | 98.5% | 0.6% |
| GmC02013_CKDL210018111-1a-AK6881-AK9148_HH72GDSX2_L1_clmp_r1r2_fastp | 25.5% | 49.5% | 98.6% | 0.6% |
| GmC02014_CKDL210018111-1a-AK9142-AK892_HH72GDSX2_L1_clmp_r1r2_fastp | 23.3% | 48.3% | 98.7% | 0.8% |
| GmC02015_CKDL210018111-1a-5UDI312-AK33_HH72GDSX2_L1_clmp_r1r2_fastp | 26.5% | 48.4% | 98.6% | 0.7% |
| GmC02016_CKDL210018111-1a-AK9142-AK4997_HH72GDSX2_L1_clmp_r1r2_fastp | 7.8% | 49.5% | 98.8% | 0.6% |
| GmC02017_CKDL210018111-1a-AK9142-7UDI243_HH72GDSX2_L1_clmp_r1r2_fastp | 20.2% | 49.3% | 98.5% | 0.7% |
| GmC02018_CKDL210018111-1a-AK9142-AK9148_HH72GDSX2_L1_clmp_r1r2_fastp | 27.4% | 49.9% | 98.5% | 0.6% |
| GmC02019_CKDL210018111-1a-AK7761-AK9148_HH72GDSX2_L1_clmp_r1r2_fastp | 28.3% | 48.6% | 98.6% | 0.7% |
| GmC02020_CKDL210018111-1a-AK6881-AK33_HH72GDSX2_L1_clmp_r1r2_fastp | 27.5% | 52.3% | 98.4% | 0.7% |
| GmC02021_CKDL210018111-1a-AK6260-7UDI227_HH72GDSX2_L1_clmp_r1r2_fastp | 11.0% | 48.1% | 100.0% | 0.6% |
| GmC02022_CKDL210018111-1a-AK3905-7UDI227_HH72GDSX2_L1_clmp_r1r2_fastp | 28.2% | 49.7% | 98.3% | 0.7% |
| GmC02023_CKDL210018111-1a-AK6881-AK4997_HH72GDSX2_L1_clmp_r1r2_fastp | 20.4% | 51.6% | 98.6% | 0.6% |
| GmC02024_CKDL210018111-1a-AK6260-AK4997_HH72GDSX2_L1_clmp_r1r2_fastp | 8.2% | 49.0% | 97.6% | 0.8% |
| GmC02025_CKDL210018111-1a-AK7010-7UDI243_HH72GDSX2_L1_clmp_r1r2_fastp | 28.7% | 49.7% | 98.3% | 0.6% |
| GmC02026_CKDL210018111-1a-AK9141-AK4997_HH72GDSX2_L1_clmp_r1r2_fastp | 26.5% | 48.8% | 98.4% | 0.6% |
| GmC02027_CKDL210018111-1a-AK7010-AK8544_HH72GDSX2_L1_clmp_r1r2_fastp | 31.4% | 51.2% | 98.5% | 0.7% |
| GmC02029_CKDL210018111-1a-5UDI298-AK892_HH72GDSX2_L1_clmp_r1r2_fastp | 25.4% | 48.3% | 98.5% | 0.7% |
| GmC02031_CKDL210018111-1a-AK9141-7UDI227_HH72GDSX2_L1_clmp_r1r2_fastp | 29.6% | 49.8% | 98.4% | 0.6% |
| GmC02033_CKDL210018111-1a-AK6881-7UDI227_HH72GDSX2_L1_clmp_r1r2_fastp | 24.1% | 49.6% | 98.5% | 0.6% |
| GmC02034_CKDL210018111-1a-AK8410-7UDI227_HH72GDSX2_L1_clmp_r1r2_fastp | 29.2% | 52.1% | 98.5% | 0.6% |
| GmC02035_CKDL210018111-1a-AK6881-AK892_HH72GDSX2_L1_clmp_r1r2_fastp | 27.3% | 48.3% | 98.5% | 0.6% |
| GmC02036_CKDL210018111-1a-AK9141-AK9148_HH72GDSX2_L1_clmp_r1r2_fastp | 27.7% | 50.3% | 98.6% | 0.7% |
| GmC02038_CKDL210018111-1a-AK7759-7UDI227_HH72GDSX2_L1_clmp_r1r2_fastp | 31.1% | 53.2% | 98.4% | 0.7% |
| GmC02039_CKDL210018111-1a-5UDI312-7UDI243_HH72GDSX2_L1_clmp_r1r2_fastp | 27.1% | 49.7% | 98.4% | 0.6% |
| GmC02041_CKDL210018111-1a-AK6881-7UDI243_HH72GDSX2_L1_clmp_r1r2_fastp | 19.9% | 50.8% | 98.3% | 0.7% |
| GmC02043_CKDL210018111-1a-5UDI298-AK4997_HH72GDSX2_L1_clmp_r1r2_fastp | 25.0% | 49.7% | 98.6% | 0.6% |
| GmC02044_CKDL210018111-1a-AK3905-7UDI243_HH72GDSX2_L1_clmp_r1r2_fastp | 27.2% | 50.1% | 98.3% | 0.7% |
| GmC02048_CKDL210018111-1a-AK7759-AK9148_HH72GDSX2_L1_clmp_r1r2_fastp | 28.7% | 52.3% | 98.4% | 0.6% |
| GmC02049_CKDL210018111-1a-AK8410-AK892_HH72GDSX2_L1_clmp_r1r2_fastp | 28.6% | 52.6% | 98.5% | 0.6% |
| GmC02050_CKDL210018111-1a-AK3905-AK9148_HH72GDSX2_L1_clmp_r1r2_fastp | 28.5% | 49.3% | 97.9% | 1.9% |
| GmC02052_CKDL210018111-1a-AK6881-7UDI298_HH72GDSX2_L1_clmp_r1r2_fastp | 26.7% | 51.8% | 98.5% | 0.6% |
| GmC02054_CKDL210018111-1a-AK3905-AK8544_HH72GDSX2_L1_clmp_r1r2_fastp | 18.5% | 49.4% | 97.9% | 2.1% |
| GmC02056_CKDL210018111-1a-AK8410-AK4997_HH72GDSX2_L1_clmp_r1r2_fastp | 28.2% | 52.1% | 98.3% | 0.6% |
| GmC02057_CKDL210018111-1a-AK7010-7UDI227_HH72GDSX2_L1_clmp_r1r2_fastp | 9.0% | 49.2% | 99.3% | 0.5% |
| GmC02059_CKDL210018111-1a-AK8410-AK8544_HH72GDSX2_L1_clmp_r1r2_fastp | 29.8% | 51.9% | 98.4% | 0.6% |
| GmC02063_CKDL210018111-1a-AK6881-AK8544_HH72GDSX2_L1_clmp_r1r2_fastp | 29.4% | 51.7% | 98.4% | 0.6% |
| GmC02064_CKDL210018111-1a-AK6260-7UDI298_HH72GDSX2_L1_clmp_r1r2_fastp | 29.2% | 53.6% | 98.5% | 0.5% |
| GmC02066_CKDL210018111-1a-AK3905-AK4997_HH72GDSX2_L1_clmp_r1r2_fastp | 19.0% | 50.3% | 98.7% | 0.6% |
| GmC02068_CKDL210018111-1a-AK7759-AK8544_HH72GDSX2_L1_clmp_r1r2_fastp | 31.8% | 53.3% | 98.4% | 0.7% |
| GmC02069_CKDL210018111-1a-AK8410-7UDI298_HH72GDSX2_L1_clmp_r1r2_fastp | 22.9% | 49.3% | 98.7% | 0.5% |
| GmC02072_CKDL210018111-1a-AK8410-AK9148_HH72GDSX2_L1_clmp_r1r2_fastp | 25.2% | 49.6% | 98.6% | 0.9% |
| GmC02075_CKDL210018111-1a-AK9142-7UDI227_HH72GDSX2_L1_clmp_r1r2_fastp | 9.7% | 48.5% | 98.9% | 0.7% |
| GmC02077_CKDL210018111-1a-AK7761-7UDI298_HH72GDSX2_L1_clmp_r1r2_fastp | 25.1% | 49.5% | 98.7% | 0.7% |
| GmC02080_CKDL210018111-1a-AK9141-AK8544_HH72GDSX2_L1_clmp_r1r2_fastp | 11.5% | 48.7% | 99.2% | 0.7% |
| GmC02082_CKDL210018111-1a-AK3905-AK892_HH72GDSX2_L1_clmp_r1r2_fastp | 27.6% | 49.2% | 98.4% | 0.7% |
| GmC02083_CKDL210018111-1a-AK3905-AK33_HH72GDSX2_L1_clmp_r1r2_fastp | 27.5% | 48.4% | 98.4% | 0.7% |
| GmC02086_CKDL210018111-1a-AK7759-AK33_HH72GDSX2_L1_clmp_r1r2_fastp | 29.4% | 50.4% | 98.2% | 0.7% |
| GmC02087_CKDL210018111-1a-AK8410-AK33_HH72GDSX2_L1_clmp_r1r2_fastp | 26.6% | 49.1% | 98.5% | 0.7% |
| GmC02092_CKDL210018111-1a-AK9141-AK892_HH72GDSX2_L1_clmp_r1r2_fastp | 28.0% | 49.3% | 98.6% | 0.7% |
| GmC02095_CKDL210018111-1a-AK7761-7UDI227_HH72GDSX2_L1_clmp_r1r2_fastp | 30.9% | 49.1% | 98.3% | 0.7% |
fastp
fastp An ultra-fast all-in-one FASTQ preprocessor (QC, adapters, trimming, filtering, splitting...)
Filtered Reads
Filtering statistics of sampled reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Duplication Rates
Duplication rates of sampled reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Insert Sizes
Insert size estimation of sampled reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Sequence Quality
Average sequencing quality over each base of all reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
GC Content
Average GC content over each base of all reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
N content
Average N content over each base of all reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
